1AL physical map

Targeted chromosomes

Click on a chromosome to access associated data (when available) at URGI Sequences Repository.

Project team

Project Leader: Hikmet Budak (budakSPAMFILTER@sabanciuniv.edu)

First name	Last name	Email	Institution	Country
Stuart J.	Lucas	slucasSPAMFILTER@sabanciuniv.edu	Sabanci University	Turkey

Project collaborators

First name	Last name	Email	Institution	Country
Hana	Šimková	simkovahSPAMFILTER@ueb.cas.cz	IEB	Czech Republic
Jaroslav	Doležel	dolezelSPAMFILTER@ueb.cas.cz	IEB	Czech Republic

Project funding

"This project was funded by the European Community's Seventh Framework Programme (FP7/ 2007-2013) under the grant agreement n°FP7-212019”

Abstract

A physical map of 1AL was constructed from 70,537 BAC high information content fluorescent fingerprints from a 1AL BAC library (see CNRGV page ). LTC assembled a map containing 583 contigs covering approximately 85% of the chromosome arm.

Publications

Lucas SJ, Simková H, Safář J, Jurman I, Cattonaro F, Vautrin S, Bellec A, Berges H, Doležel J, Budak H. Functional features of a single chromosome arm in wheat (1AL) determined from its structure. in Funct Integr Genomics, 2011.

Lucas, S. J., B. A. Akpınar, M. Kantar, Z. Weinstein, F. Aydınoğlu, J. Šafář, H. Šimková, Z. Frenkel, A. Korol, F. Magni, F. Cattonaro, S. Vautrin, A. Bellec, H. Bergès, J. Doležel and H. Budak (2013). " Physical Mapping Integrated with Syntenic Analysis to Characterize the Gene Space of the Long Arm of Wheat Chromosome 1A ." PLoS ONE 8(4): e59542.

Projects