TRITEX
Targeted chromosomes
|
Project team
| First name | Last name | Institution | Country | |
|---|---|---|---|---|
| Naser | Poursarebani | poursarebaniSPAMFILTER@ipk-gatersleben.de | IPK | Germany |
| Uwe | Scholz | scholzSPAMFILTER@ipk-gatersleben.de | IPK | Germany |
| Nils | Stein | steinSPAMFILTER@ipk-gatersleben.de | IPK | Germany |
Project collaborators
| First name | Last name | Institution | Country | |
|---|---|---|---|---|
| Jaroslav | Dolezel | dolezelSPAMFILTER@ueb.cas.cz | IEB | Czech Republic |
| Klaus | Mayer | k.mayerSPAMFILTER@helmholtz-muenchen.de | MIPS | Germany |
| Thomas | Nussbaumer | thomas.nussbaumerSPAMFILTER@helmholtz-muenchen.de | MIPS | Germany |
| Herco | van Liere | herco.van-liereSPAMFILTER@keygene.com | KeyGene | The Netherlands |
| Hanneke | Witsenboer | hanneke.witsenboerSPAMFILTER@keygene.com | KeyGene | The Netherlands |
Project funding
This project was funded by the Bundesministerium für Bildung und Forschung (BMBF), the German Federal Ministry for Education and Research. In addition to the BMBF funding, KeyGene has provided significant in-kind contributions to the 6A physical mapping project.
Abstract
The 6A physical mapping effort is a sub-project of the broader TRITEX project that includes barley and is coordinated by Nils Stein.
Physical maps for 6AS and 6AL have been assembled using LTC from whole genome profile (WGP) sequence tags of 18,820 (6AS) and 17,309 (6AL) BACs from chromosome arm libraries developed in the lab of J. Dolozel (IEB, Czech Republic) (see CNRGV page ). The assemblies contain 293 and 545 contigs (> 5 BACs), respectively, covering over 100% of the estimated lengths of the chromosome arms.
Publications
Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A. Poursebani, N., Nussbaumer, T., Šimkova, H., Witsenboer, H., van Oeveren, J., Mayer, K.F.X., N. Stein, Schnurbusch, T. Plant Journal 2014 79:334-347. Doi: 10.1111/tpj.12550