Targeted chromosomes
Click on a chromosome to access associated data (when available) at URGI Sequences Repository.
Project team
| First name | Last name | Email | Institution | Country |
|---|
| Jaroslav |
Dolezel |
dolezelSPAMFILTER@ueb.cas.cz |
IEB |
Czech Republic |
| Kadri |
Järve |
kadri.jarveSPAMFILTER@ttu.ee |
Tallinn University of Technology |
Estonia |
| Hana |
Simkova |
simkovahSPAMFILTER@ueb.cas.cz |
IEB |
Czech Republic |
| Jan |
Safar |
safarSPAMFILTER@ueb.cas.cz |
IEB |
Czech Republic |
| Jan |
Bartos |
bartosSPAMFILTER@ueb.cas.cz |
IEB |
Czech Republic |
| Jarmila |
Cihalikova |
cihalikovaSPAMFILTER@ueb.cas.cz |
IEB |
Czech Republic |
Project collaborators
| First name | Last name | Email | Institution | Country |
|---|
| Pilar |
Hernandez |
phernandezSPAMFILTER@ias.csic.es |
IAS (CSIC) |
Spain |
| Ming-Cheng |
Luo |
mcluoSPAMFILTER@ucdavis.edu |
UC, Davis |
USA |
| Klaus |
Mayer |
K.mayerSPAMFILTER@helmholtz-muenchen.de |
MIPS |
Germany |
Project funding
This project was funded by the Czech Science Foundation
Abstract
Physical maps for 4AS and 4AL have been constructed from chromosome arm specific BAC libraries (see
CNRGV page
). High information content fluorescent (HICF) fingerprints from 32944 (4AS) and 60140 (4AL) BACs have been assembled with LTC to produce physical maps containing 250 and 924 contigs, respectively, covering 86% and 89% of the estimated lengths of the chromosome arms.
Publications
- Hernandez, P., Martis, M., Dorado, G., Pfeifer, M., Schaaf, S., Jouve, N., Šimková, H., Valárik, M., Doložel, J., Mayer, K.F. Next generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content. Plant J. 2012 69(3):377-86.
DOI 10.1111/j.1365-313X.2011.04808.x
- Randhawa, M., Bansai, U., Valárik, M., Klocová, B., Doložel, J., Bariana, H. Molecular mapping of stripe rust resistance gene Yr51 in chromosome 4AL of wheat. Theor Appl Genet. 2014 127(2):317-24.
DOI 10.1007/s00122-013-2220-8
- Tsõmbalova, J., Karafiátová, M., Vrána, J., Kubaláková, M., Peuša, H., Jakobson, I., Järve, M., Valárik, M., Doložel, J., Järve, K. A haplotype specific to North European wheat (Triticum aestivum L.) Genetic Resources and Crop Evolution; March 2016.
DOI 10.1007/s10722-016-0389-9